mpm.levels: Ultrasound features levels

In Morphonodepredictivemodel/morphonode: The Morphonode Predictive Model for ultrasound signatures detection and malignancy prediction in vulvar cancer

Ultrasound features levels

Description

A list of 14 elements containing the levels of each ultrasound feature.

Usage

mpm.levels

Format

"mpm.levels" is a list of 14 vectors, each containing the levels of an ultrasound feature. Continuous features (i.e., short axis and cortical thickness) have the nominal value of 0. Levels are used by predictive functions to switch from numeric to factor classes.

Examples

# Generate a simulated malignant ultrasound profile
x <- new.profile(us.simulate(y = 1))

# Prepare the profile for RFC malignancy prediction
u <- set.rfcdata(x, ref = mpm.us[, 2:15], levels = mpm.levels)
print(u)

# Predict subject's phenotype
P <- rfc.predict(u$ultrasound, rfc = mpm.rfc$rfc)
print(P)

Morphonodepredictivemodel/morphonode documentation built on Feb. 15, 2023, 4:51 a.m.