single_pass_normalization: Single Pass Normalization

In MoseleyBioinformaticsLab/ScanCentricPeakCharacterization: Functionality for Characterizing Peaks in Mass Spectrometry in a Scan-Centric Manner

Single Pass Normalization

Description

Does a single pass of normalizing scans to each other.

Usage

single_pass_normalization(
  scan_peaks,
  intensity_measure = c("RawHeight", "Height"),
  summary_function = median,
  use_peaks = NULL,
  min_ratio = 0.7
)

Arguments

scan_peaks	the scan peaks to normalize
intensity_measure	which intensities to normalize
summary_function	which function to use to calculate summaries (median)
use_peaks	which peaks to use for normalization
min_ratio	what ratio of maximum intensity of peaks should we use for normalization

Value

scan_peaks list

MoseleyBioinformaticsLab/ScanCentricPeakCharacterization documentation built on March 29, 2024, 11:32 p.m.