NEWS.md

In MoultDB/moultdbtools: Create Custom Taxonomies Based on the NCBI Taxonomy and GBIF Backbone Taxonomy

taxonbridge 1.2.2

• Optimized download_ncbi() [Thanks to https://github.com/shenwei356]
• Updated co-author and citation information

taxonbridge 1.2.1

• Fixed bug in download_ncbi() method
• Updated download_ncbi() and download_gbif() with file checks

taxonbridge 1.2.0

• Load methods now convert all columns to character data type
• Documentation updates

taxonbridge 1.1.0

• New hexagonal logo and workflow
• Updated vignette
• Updated fuzzy_search() method with force_binomial parameter
• Additional NCBI columns in merged taxonomy [BREAKING CHANGE]
• Updated get_taxa() method

taxonbridge 1.0.5

• Added dedupe() method

taxonbridge 1.0.4

• Updated get_validity() method
• Fixed bug in load_taxonomies() when reading in GBIF data with vroom
• Updated vignette
• Added annotate() method

taxonbridge 1.0.3

• Updated v1.0.2 documentation
• Added fuzzy_search() method
• Added download_gbif() method
• Added set operation parameter to get_inconsistencies()
• Fixed bug in get_inconsistencies() when uninomials are set to true
• Added download_ncbi() method

taxonbridge 1.0.2

• Added get_taxa() method
• Added a vignette
• Added get_inconsistencies() method
• Added merge stats to load_taxonomies() output tibble attributes fields
• Added provenance columns to load_taxonomies() output tibble
• Fixed bug when loading stub data with load_taxonomies()
• Added taxonbridge logo

MoultDB/moultdbtools documentation built on Feb. 2, 2024, 5:21 p.m.