draw_heatmap: Draw sample-to-sample heatmap
In NCBI-Hackathons/HLAClustRView: HLA typing clustering and visualization based on specific similarity metrics
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Create and draw a sample-to-sample heatmap using the
metric distances.
Usage
1
draw_heatmap(hlaMetric, ...)
Arguments
hlaMetric
an object of class hlaMetric that contain the
distance between samples.
...
arguments passed to the Heatmap method
Value
A Heatmap-class object.
Author(s)
Astrid Deschênes, Pascal Belleau
Examples
1
2
3
4
5
6
7
8
## Load example dataset
data(demoHLADataset)
## Calculate Hamming distance metric
hammingMetric <- calculateHamming(demoHLADataset)
## Create sample-to-sample heatmap
draw_heatmap(hammingMetric)
NCBI-Hackathons/HLAClustRView documentation built on Nov. 22, 2019, 6:11 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Create and draw a sample-to-sample heatmap using the metric distances.
Usage
1 | draw_heatmap(hlaMetric, ...)
|
Arguments
hlaMetric |
an object of class |
... |
arguments passed to the |
Value
A Heatmap-class object.
Author(s)
Astrid Deschênes, Pascal Belleau
Examples
1 2 3 4 5 6 7 8 | ## Load example dataset
data(demoHLADataset)
## Calculate Hamming distance metric
hammingMetric <- calculateHamming(demoHLADataset)
## Create sample-to-sample heatmap
draw_heatmap(hammingMetric)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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