runAnnotator: Run annotator3D as a Shiny app

Description Usage Details Examples

View source: R/runAnnotationApp.R

Description

runAnnotationApp runs annotator3D as a Shiny app. The user needs to upload FIMO matched motif TSV file and a TSV file containing predicted chromatin loops. The user can then customize parameters of visualization such as lower bound for loop membership score, and Gviz plotting options.

Usage

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Details

Example TSV files are included in extdata to run annotator3D.

Examples

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## Not run: 
  runAnnotator()

## End(Not run)

NElnour/annotator3D documentation built on Dec. 8, 2019, 9:22 a.m.