lefse.phylo: Community phylogeny for lefse

In NGSwenson/lefse_0.5: Phylogenetic and Functional Analyses for Ecology

Description

Community phylogeny for lefse package. Phylogeny contains 10 species.

Usage

data("lefse.phylo")

Format

The format is: List of 4 $ edge : int [1:18, 1:2] 11 12 13 14 14 13 12 15 15 16 ... $ Nnode : int 9 $ tip.label : chr [1:10] "sp10" "sp5" "sp8" "sp2" ... $ edge.length: num [1:18] 0.8062 0.2151 0.055 0.0565 0.0565 ... - attr(*, "class")= chr "phylo" - attr(*, "order")= chr "cladewise"

Source

Swenson, N.G. 2014. Functional and Phylogenetic Ecology in R. Springer UseR! Series, Springer, New York, New York, U.S.A.

Examples

data(lefse.phylo)
lefse.phylo
plot(lefse.phylo)

NGSwenson/lefse_0.5 documentation built on May 7, 2019, 6:01 p.m.