bag_load_models: Load a series of files output of fit_net_clogit models and...

In NINAnor/oneimpact: Tools for the assessment of the cumulative impacts of anthropogenic features in ecological studies

Load a series of files output of fit_net_clogit models and put them on a bag

Description

Load a series of files output of fit_net_clogit models and put them on a bag

Usage

bag_load_models(
  data,
  load_models_path = ".",
  load_models_pattern = NULL,
  names_from_file = FALSE,
  name_from_file_pattern = "Resample",
  verbose = FALSE
)

Arguments

data	⁠[data.frame,tibble]⁠ Complete data set analyzed.
load_models_path	⁠[string="."]⁠ Path to the folder where the files are saved.
load_models_pattern	⁠[string="."]⁠ Pattern common to the file names, to be used in grep() to find the files within the folder load_models_path. It should be the pattern present in the argument out_dir_file in fit_net_clogit() or bag_fit_net_clogit() functions.
names_from_file	⁠[logical(1)=TRUE]⁠ If FALSE (default), the names of the resamples are taken from the samples parameter. If TRUE, they are taken from the files names, instead. In this case, the string defined by the parameter name_from_file_pattern is used to identify the number of each resample.
name_from_file_pattern	⁠[string="Resample"]⁠ String used to separate the file name and identify the number of the resample of each model in the bag, when they are read from files. The parameters metric, standardize, and method should be same ones used to fit the bag of models.
f	⁠[formula]⁠ Formula of the models fitted, with all possible candidate terms.
samples	⁠[list]⁠ List of samples with at least three elements: train, test, and validate. Each elements might have several elements, each representing the lines of data to be sampled for each resample. Typically, this is computed by the function create_resamples().

NINAnor/oneimpact documentation built on June 14, 2025, 12:27 a.m.