sampleData: Default data

In Neurergus/MOSim: Multi-Omics Simulation (MOSim)

Default data

Description

Dataset with base counts and id-gene tables.

Usage

sampleData

Format

An object of class list of length 6.

Details

List with 6 elements:

SimRNAseq

data

Dataframe with base counts with gene id as rownames.

geneLength

Length of every gene.

SimChIPseq

data

Dataframe with base counts with regions as rownames.

idToGene

Dataframe with region as "ID" column and gene name on "Gene" column.

SimDNaseseq

data

Dataframe with base counts with regions as rownames.

idToGene

Dataframe with region as "ID" column and gene name on "Gene" column.

SimMiRNAseq

data

Dataframe with base counts with miRNA id as rownames.

idToGene

Dataframe with miRNA as "ID" column and gene name on "Gene" column.

SimMethylseq

idToGene

Dataframe with region as "ID" column and gene name on "Gene" column.

CpGisland

Dataframe of CpG to be used as initialization data, located on "Region" column

Neurergus/MOSim documentation built on Feb. 23, 2024, 8:29 a.m.