zscorePlot: Visulization of Z-score heatmap.
In Nina-Song/stJoincount: stJoincount - Join count statistic for quantifying spatial correlation between clusters
View source: R/zscoreHeatmap.R
zscorePlot R Documentation
Visulization of Z-score heatmap.
Description
Visulization of Z-score heatmap.
Usage
zscorePlot(zscoreMatrix)
Arguments
zscoreMatrix
calculated and reshaped z-score matirx from join count analysis.
Value
A Heatmap plot
Examples
fpath <- system.file("extdata", "dataframe.rda", package="stJoincount")
load(fpath)
mosaicIntegration <- rasterizeEachCluster(humanBC)
joincount.result <- joincountAnalysis(mosaicIntegration)
matrix <- zscoreMatrix(humanBC, joincount.result)
zscorePlot(matrix)
Nina-Song/stJoincount documentation built on Nov. 24, 2024, 8:31 a.m.
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View source: R/zscoreHeatmap.R
| zscorePlot | R Documentation |
Visulization of Z-score heatmap.
Description
Visulization of Z-score heatmap.
Usage
zscorePlot(zscoreMatrix)
Arguments
zscoreMatrix |
calculated and reshaped z-score matirx from join count analysis. |
Value
A Heatmap plot
Examples
fpath <- system.file("extdata", "dataframe.rda", package="stJoincount")
load(fpath)
mosaicIntegration <- rasterizeEachCluster(humanBC)
joincount.result <- joincountAnalysis(mosaicIntegration)
matrix <- zscoreMatrix(humanBC, joincount.result)
zscorePlot(matrix)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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