control_trip_map: Trip data consistency control

In OB7-IRD/fishi: Package Fisheries Indicators

Trip data consistency control

Description

Check the consistency between logbook and observer data (Positions, number of sets and deployments)

Usage

control_trip_map(
  dataframe_observe,
  dataframe_logbook,
  dataframe_vms,
  trip_i,
  graph_type = "plot",
  control_dist_vms = FALSE,
  path_to_png = NULL
)

Arguments

dataframe_observe	data.frame expected. Dataframe from the Observe database. Csv or output of the function data_extraction, which must be done before using the data_availability() function.
dataframe_logbook	data.frame expected. Dataframe from the logbook database. Csv or output of the function data_extraction, which must be done before using the data_availability() function.
dataframe_vms	data.frame expected. Dataframe from the Vms database. Csv or output of the function data_extraction, which must be done before using the data_availability() function.
trip_i	character expected. Date + # + vessel name.
graph_type	character expected. plot or ggplot Plot by default.
control_dist_vms	TRUE or FALSE. FALSE by default.
path_to_png	character expected. Add a link to the path to save the figure as a png.

Details

The input dataframe must contain all these columns for the function to work [see referentials]: Dataframe observe:

   program          | vessel_label | observer_name | trip_end_date | observation_date | observation_time | vessel_activity_code | latitude | longitude | operation_on_object_code | fob_type_when_arriving | activity_id
   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
   DCF Senne (IRD)  | AVEL VAD     | Martin        | 2022-05-03    | 2022-04-13       | 14:45:00         | 16                   | -3.7600  | 57.1900   | NA                       | /                      | fr.ird.data.ps.observation.Activity#164986
   DCF Senne (IRD)  | BELLE ISLE   | Martin        | 2022-05-03    | 2022-04-13       | 02:15:00         | 0                    | -4.6248  | 55.4552   | NA                       | /                      | fr.ird.data.ps.observation.Activity#164987
   DCF Senne (IRD)  | BELLE ISLE   | Martin        | 2022-05-03    | 2022-04-13       | 10:18:00         | 13                   | -3.9707  | 57.0382   | 2                        | DFAD                   | fr.ird.data.ps.observation.Activity#164988

Dataframe logbook:

   vessel_label | latitude | longitude | activity_date | number | vessel_activity_code | activity_id
   --------------------------------------------------------------------------------------------------------------------
   AVEL VAD     | 4.9668   | 59.2168   | 2022-01-01    | 1      |  6                   | fr.ird.data.ps.logbook.Activity#170
   AVEL VAD     | 4.9668   | 59.2175   | 2022-01-01    | 2      | 13                   | fr.ird.data.ps.logbook.Activity#171
   AVEL VAD     | 5.0168   | 59.2785   | 2022-01-01    | 3      | 13                   | fr.ird.data.ps.logbook.Activity#172

Dataframe vms:

   vessel_label |  activity_date | longitude | latitude | time     |
   -------------------------------------------------------------
   AVEL VAD     |  2022-04-13    | 59.197    | 4.909    | 01:05:00 |
   BELLE RIVE   |  2022-04-13    | 59.654    | 4.712    | 01:10:00 |
   BELLE RIVE   |  2022-04-13    | 59.951    | 4.632    | 02:25:00 |

Value

The function return ggplot R plot.

OB7-IRD/fishi documentation built on Feb. 4, 2025, 2:03 a.m.