data_availability: Assessing data availability
In OB7-IRD/fishi: Package Fisheries Indicators

data_availability

R Documentation

Assessing data availability

Description

Control to verify the availability of logbook, observer and vms data.

Usage

data_availability(
  dataframe_observe,
  dataframe_logbook,
  dataframe_vms,
  reported_year,
  ocean = "Atlantic",
  graph_type = "plot",
  path_to_png = NULL
)

Arguments

`dataframe_observe`	data.frame expected. Dataframe from the Observe database. Csv or output of the function data_extraction, which must be done before using the data_availability() function.
`dataframe_logbook`	data.frame expected. Dataframe from the logbook database. Csv or output of the function data_extraction, which must be done before using the data_availability() function.
`dataframe_vms`	data.frame expected. Dataframe from the Vms database. Csv or output of the function data_extraction, which must be done before using the data_availability() function.
`reported_year`	integer expected. Year of the report.
`ocean`	character expected. Atlantic or Indian Atlantic by default.
`graph_type`	character expected. plot or plotly. Plot by default.
`path_to_png`	character expected. Add a link to the path to save the figure as a png.

Details

The input dataframe must contain all these columns for the function to work [see referentials]: Dataframe observe:

   vessel_label  |  observation_date |
   ----------------------------------
   AVEL VAD      |  2022-04-13       |
   BELLE ISLE    |  2022-04-13       |
   BELLE RIVE    |  2022-04-13       |

Dataframe logbook:

   vessel_label |  date        |
   -----------------------------
   AVEL VAD     |  2022-04-13  |
   BELLE ISLE   |  2022-04-13  |
   BELLE RIVE   |  2022-04-13  |

Dataframe vms:

   vessel_label |  date        | longitude |
   -----------------------------------------
   AVEL VAD     |  2022-04-13  | 59.197    |
   BELLE ISLE   |  2022-04-13  | 59.654    |
   BELLE RIVE   |  2022-04-13  | 59.951    |