Files in OB7-IRD/t3
Tropical Tuna Treatment
.Rbuildignore
.github/.gitignore
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/custom.md
.github/ISSUE_TEMPLATE/feature_request.md
.github/workflows/check-release.yaml
.github/workflows/check-standard.yaml
.github/workflows/pkgdown.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/activities.R
R/activity.R
R/catch_ci_calculator.R
R/checks.R
R/data_model_initialisation.R
R/df2boot.R
R/elementarycatch.R
R/elementarycatches.R
R/elementarylanding.R
R/elementarylandings.R
R/elementarysample.R
R/elementarysampleraw.R
R/elementarysamples.R
R/elementarysamplesraw.R
R/elementarywellplan.R
R/elementarywellplans.R
R/full_trips.R
R/initiate_directory.R
R/initiate_log_file.R
R/list_t3.R
R/object_model_data.R
R/object_r6.R
R/samples.R
R/standardisedsample.R
R/standardisedsamples.R
R/standardisedsampleset.R
R/standardisedsamplesets.R
R/t3-package.R
R/t3_level1.R
R/t3_level2.R
R/t3_level3.R
R/t3_process.R
R/trip.R
R/trips.R
R/tunaboot.R
R/tunapredict.R
R/utils-pipe.R
R/well.R
R/wells.R
R/wellset.R
R/wellsets.R
README.Rmd
README.md
_pkgdown.yml
inst/lengthsteps.csv
inst/lengthweightrelationships.csv
inst/setdurationrefs.csv
inst/sql/avdth/avdth_activities.sql
inst/sql/avdth/avdth_elementarycatches.sql
inst/sql/avdth/avdth_elementarylandings.sql
inst/sql/avdth/avdth_lengthweightrelationships.sql
inst/sql/avdth/avdth_samples.sql
inst/sql/avdth/avdth_samplesets.sql
inst/sql/avdth/avdth_trip.sql
inst/sql/avdth/avdth_wellplans.sql
inst/sql/t3_activities.sql
inst/sql/t3_elementarycatches.sql
inst/sql/t3_elementarylandings.sql
inst/sql/t3_lengthsteps.sql
inst/sql/t3_lengthweightrelationships.sql
inst/sql/t3_samples.sql
inst/sql/t3_samplesets.sql
inst/sql/t3_setdurationrefs.sql
inst/sql/t3_trips.sql
inst/sql/t3_wellplans.sql
inst/test_data/data_test.RData
inst/wrld_simpl.RData
man/activities.Rd
man/activity.Rd
man/catch_ci_calculator.Rd
man/check_activity_code.Rd
man/check_activity_date.Rd
man/check_activity_id.Rd
man/check_activity_latitude.Rd
man/check_activity_longitude.Rd
man/check_activity_name.Rd
man/check_activity_number.Rd
man/check_catch_weight.Rd
man/check_departure_date.Rd
man/check_elementarycatch_id.Rd
man/check_elementarylanding_id.Rd
man/check_elementarysampleraw_id.Rd
man/check_fish_hold_empty.Rd
man/check_fleet.Rd
man/check_landing_category.Rd
man/check_landing_category_name.Rd
man/check_landing_date.Rd
man/check_landing_weight.Rd
man/check_length_type.Rd
man/check_logbook_availability.Rd
man/check_logbook_category.Rd
man/check_logbook_category_name.Rd
man/check_ocean.Rd
man/check_sample_id.Rd
man/check_sample_length_class.Rd
man/check_sample_number_measured.Rd
man/check_sample_number_measured_extrapolated_lf.Rd
man/check_sample_number_weighted.Rd
man/check_sample_quality.Rd
man/check_sample_standardised_length_class_lf.Rd
man/check_sample_total_count.Rd
man/check_sample_type.Rd
man/check_school_type.Rd
man/check_set_count.Rd
man/check_specie_code.Rd
man/check_specie_code3l.Rd
man/check_sub_sample_id.Rd
man/check_sub_sample_id_total_count.Rd
man/check_time_at_sea.Rd
man/check_trip_id.Rd
man/check_vessel_id.Rd
man/check_vessel_type.Rd
man/check_weighted_weight.Rd
man/check_well_global_weigth.Rd
man/check_well_id.Rd
man/check_well_minus10_weigth.Rd
man/check_well_plus10_weigth.Rd
man/check_wellplan_id.Rd
man/check_wellplan_number.Rd
man/check_wellplan_weight.Rd
man/check_wellplan_weigth_category_code.Rd
man/check_wellplan_weigth_category_label.Rd
man/data_model_initialisation.Rd
man/df2boot.Rd
man/elementarycatch.Rd
man/elementarycatches.Rd
man/elementarylanding.Rd
man/elementarylandings.Rd
man/elementarysample.Rd
man/elementarysampleraw.Rd
man/elementarysamples.Rd
man/elementarysamplesraw.Rd
man/elementarywellplan.Rd
man/elementarywellplans.Rd
man/figures/logo.png
man/figures/logo_obs7.png
man/full_trips.Rd
man/initiate_directory.Rd
man/initiate_log_file.Rd
man/list_t3.Rd
man/object_model_data.Rd
man/object_r6.Rd
man/pipe.Rd
man/samples.Rd
man/standardisedsample.Rd
man/standardisedsamples.Rd
man/standardisedsampleset.Rd
man/standardisedsamplesets.Rd
man/t3-package.Rd
man/t3_level1.Rd
man/t3_level2.Rd
man/t3_level3.Rd
man/t3_process.Rd
man/trip.Rd
man/trips.Rd
man/tunaboot.Rd
man/tunapredict.Rd
man/well.Rd
man/wells.Rd
man/wellset.Rd
man/wellsets.Rd
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
t3.Rproj
tests/testthat.R
tests/testthat/test-1_object_model_data.R
tests/testthat/test-2_full_trips.R
vignettes/level_1.Rmd
vignettes/level_2.Rmd
vignettes/level_3.Rmd
vignettes/model_initialisation.Rmd
vignettes/process_1.1.png
vignettes/process_1.2.png
vignettes/process_1.3.png
vignettes/process_1.4.png
vignettes/process_1.5.png
vignettes/process_1.6.png
vignettes/process_1.7.png
vignettes/process_1.8.png
vignettes/process_2.1.png
vignettes/process_2.2.png
vignettes/process_2.3.png
vignettes/process_2.4.png
vignettes/process_2.5.png
vignettes/process_2.6.png
vignettes/process_2.7.png
vignettes/process_2.8.png
vignettes/process_3.1.png
vignettes/process_3.2.png
vignettes/process_3.3.png
vignettes/process_3.4.png
vignettes/process_3.5.png
vignettes/running_processes_examples.R
vignettes/running_processes_examples.Rmd
vignettes/running_processes_examples.html
vignettes/running_processes_examples.md
