Man pages for OHDSI/Aphrodite
Automated PHenotype Routine for Observational Definition Identification Training and Evaluation (APHRODITE) - Phenotype building tool using Fuzzy labels
| buildFeatureVector | This function builds a feature vector using raw patient data |
| buildKeywordList | This function generates keyword and ignore lists based on the... |
| buildModel | This function builds a model for the specified feature vector... |
| combineFeatureVectors | This function combines all of the desired feature types into... |
| conceptDecoder | This function returns the concept terms corresponding to an... |
| convertFeatVecPortion | This function builds a feature vector for a specific subset... |
| executeSQL | This function executes one single SQL statement |
| f_score_calc | This function creates a summary metric for model training |
| getAnchors | This function allows Anchor recommendation |
| getdPatientCohort | This function builds a patient cohort (and controls) based on... |
| getNormalizationTerm | This function returns the normalizing factor, based upon the... |
| getPatientCohort_w_Anchors | This function builds a patient cohort (and controls) based on... |
| getPatientData | This function fetches all the patient data (generic) |
| getPatientDataCases | This function fetches all the patient data (non-generic)... |
| getPatientDataFromStartDate | This function fetches all the patient data (generic) - from a... |
| getPatientDataStartEnd | This function fetches all the patient data (generic) - from a... |
| manipulateSqlPull | This function performs the manipulation of the sql extract... |
| plotFeatWeightings | This function plots the feature importance weightings |
| runGUI | This function runs the shiny app |
