Description Usage Arguments Details Value Examples
This function fetches all the patient data (generic). Returns raw patient data.
1 2 | getPatientData(connection, dbms, patient_ids, keywords, flags, schema,
removeDomains = c(""))
|
connection |
The connection to the database server. |
dbms |
The target DBMS for SQL to be rendered in. |
patient_ids |
The list of case patient id's to extract data from - NOT a data.frame. |
keywords |
The list of concept_id's that are NOT wanted to be used as features |
flags |
The R dataframe that contains all feature/model flags specified in settings.R. |
schema |
The database schema being used. |
removeDomains=” |
List of domains to not include as features, if any are specified in settings file |
Based on the groups of feature sets determined in the flags variable, this function will fetch patient data. The function returns all patient information
An object containing the raw feature sets for the patient data.
1 2 3 4 5 6 | ## Not run:
dataFcontrols <- getPatientData(conn, dbms, controls, flag , cdmSchema)
## End(Not run)
|
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