buildKeywordList: This function generates keyword and ignore lists based on the...

In OHDSI/Aphrodite: Automated PHenotype Routine for Observational Definition Identification Training and Evaluation (APHRODITE) - Phenotype building tool using Fuzzy labels

Description

Given any given concept_id or string of text this function generates keyword and ignore lists based on the expansion of concepts (looking at their synonyms).

Usage

buildKeywordList(connection, aphroditeConceptName, schema, dbms)

Arguments

connection	The connection to the database server.
aphroditeConceptName	The string of text / concept name to use.
schema	The database schema being used.
dbms	The target DBMS for SQL to be rendered in.

Details

Takes the aphroditeConceptName looks for synonyms and builds a list of related concepts using the vocabulary hierarchies

Value

A list with two elements: a list of positive keywords found (keywordlist_ALL), and a list of ignore keywords (ignorelist_ALL)

Examples

## Not run: 

wordLists <- buildKeywordList(conn, aphrodite_concept_name, cdmSchema, dbms)


## End(Not run)

OHDSI/Aphrodite documentation built on Sept. 18, 2020, 10:26 p.m.