Files in OHDSI/DDLgeneratr
OMOP CDM DDL and Documentation Generator
.DS_Store
.Rbuildignore
.Rhistory
.Rproj.user/4FB7AB11/console06/INDEX001
.Rproj.user/4FB7AB11/cpp-definition-cache
.Rproj.user/4FB7AB11/pcs/debug-breakpoints.pper
.Rproj.user/4FB7AB11/pcs/files-pane.pper
.Rproj.user/4FB7AB11/pcs/source-pane.pper
.Rproj.user/4FB7AB11/pcs/windowlayoutstate.pper
.Rproj.user/4FB7AB11/pcs/workbench-pane.pper
.Rproj.user/4FB7AB11/persistent-state
.Rproj.user/4FB7AB11/rmd-outputs
.Rproj.user/4FB7AB11/saved_source_markers
.Rproj.user/4FB7AB11/sources/prop/1ED7E0F8
.Rproj.user/4FB7AB11/sources/prop/2C3567A3
.Rproj.user/4FB7AB11/sources/prop/34326317
.Rproj.user/4FB7AB11/sources/prop/3AB84BDD
.Rproj.user/4FB7AB11/sources/prop/3B516F87
.Rproj.user/4FB7AB11/sources/prop/46F78E5D
.Rproj.user/4FB7AB11/sources/prop/52D29639
.Rproj.user/4FB7AB11/sources/prop/5864D843
.Rproj.user/4FB7AB11/sources/prop/67D5FD05
.Rproj.user/4FB7AB11/sources/prop/81A8B211
.Rproj.user/4FB7AB11/sources/prop/91A028A6
.Rproj.user/4FB7AB11/sources/prop/9A64E16F
.Rproj.user/4FB7AB11/sources/prop/9F4BDB97
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.Rproj.user/4FB7AB11/sources/prop/B745766A
.Rproj.user/4FB7AB11/sources/prop/C0605BCB
.Rproj.user/4FB7AB11/sources/prop/CE42772F
.Rproj.user/4FB7AB11/sources/prop/D0BA94EE
.Rproj.user/4FB7AB11/sources/prop/FB7FDF49
.Rproj.user/4FB7AB11/sources/prop/INDEX
.Rproj.user/shared/notebooks/patch-chunk-names
.Rproj.user/shared/notebooks/paths
.gitignore
CdmDdlBase.Rproj
DESCRIPTION
LICENSE
NAMESPACE
R/WikiParser.R
R/createDdlFromFile.R
R/createFkFromFile.R
R/createPkFromFile.R
R/downloadCurrentDdl.R
R/writeConstraints.R
R/writeDDL.R
R/writeIndex.R
R/writePrimaryKeys.R
README.md
docs/background.html
docs/cdm30.html
docs/cdm531.html
docs/cdm531.pdf
docs/cdm60.html
docs/contribute.html
docs/dataModelConventions.html
docs/download.html
docs/drug_dose.html
docs/faq.html
docs/favicon.html
docs/favicon.ico
docs/images/ATLAS_Persistence_Window.png
docs/images/Athena_download_box.png
docs/images/Sepsis_to_SNOMED.png
docs/images/Usagi.png
docs/images/diabetes-related_case.png
docs/images/downloadJava.png
docs/images/downloadR.png
docs/images/downloadRStudio.png
docs/images/important.png
docs/images/mapping_of_concepts.png
docs/images/no32Bits.png
docs/images/pregnancy-related_case.png
docs/images/rDestination.png
docs/index.html
docs/ohdsi16x16.png
docs/ohdsi40x40.png
docs/oncology.html
docs/queries.html
docs/reviewProposals.html
docs/site_libs/bootstrap-3.3.5/css/bootstrap-theme.css
docs/site_libs/bootstrap-3.3.5/css/bootstrap-theme.css.map
docs/site_libs/bootstrap-3.3.5/css/bootstrap-theme.min.css
docs/site_libs/bootstrap-3.3.5/css/bootstrap.css
docs/site_libs/bootstrap-3.3.5/css/bootstrap.css.map
docs/site_libs/bootstrap-3.3.5/css/bootstrap.min.css
docs/site_libs/bootstrap-3.3.5/css/cerulean.min.css
docs/site_libs/bootstrap-3.3.5/css/cosmo.min.css
docs/site_libs/bootstrap-3.3.5/css/darkly.min.css
docs/site_libs/bootstrap-3.3.5/css/flatly.min.css
docs/site_libs/bootstrap-3.3.5/css/fonts/Lato.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/LatoBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/LatoItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/NewsCycle.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/NewsCycleBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSans.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansBoldItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansLight.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/OpenSansLightItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/Raleway.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/RalewayBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/Roboto.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/RobotoBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/RobotoLight.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/RobotoMedium.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/SourceSansPro.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/SourceSansProBold.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/SourceSansProItalic.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/SourceSansProLight.ttf
docs/site_libs/bootstrap-3.3.5/css/fonts/Ubuntu.ttf
docs/site_libs/bootstrap-3.3.5/css/journal.min.css
docs/site_libs/bootstrap-3.3.5/css/lumen.min.css
docs/site_libs/bootstrap-3.3.5/css/paper.min.css
docs/site_libs/bootstrap-3.3.5/css/readable.min.css
docs/site_libs/bootstrap-3.3.5/css/sandstone.min.css
docs/site_libs/bootstrap-3.3.5/css/simplex.min.css
docs/site_libs/bootstrap-3.3.5/css/spacelab.min.css
docs/site_libs/bootstrap-3.3.5/css/united.min.css
docs/site_libs/bootstrap-3.3.5/css/yeti.min.css
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.eot
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.svg
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.ttf
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.woff
docs/site_libs/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.woff2
docs/site_libs/bootstrap-3.3.5/js/bootstrap.js
docs/site_libs/bootstrap-3.3.5/js/bootstrap.min.js
docs/site_libs/bootstrap-3.3.5/js/npm.js
docs/site_libs/bootstrap-3.3.5/shim/html5shiv.min.js
docs/site_libs/bootstrap-3.3.5/shim/respond.min.js
docs/site_libs/font-awesome-5.1.0/css/all.css
docs/site_libs/font-awesome-5.1.0/css/v4-shims.css
docs/site_libs/font-awesome-5.1.0/webfonts/fa-brands-400.eot
docs/site_libs/font-awesome-5.1.0/webfonts/fa-brands-400.svg
docs/site_libs/font-awesome-5.1.0/webfonts/fa-brands-400.ttf
docs/site_libs/font-awesome-5.1.0/webfonts/fa-brands-400.woff
docs/site_libs/font-awesome-5.1.0/webfonts/fa-brands-400.woff2
docs/site_libs/font-awesome-5.1.0/webfonts/fa-regular-400.eot
docs/site_libs/font-awesome-5.1.0/webfonts/fa-regular-400.svg
docs/site_libs/font-awesome-5.1.0/webfonts/fa-regular-400.ttf
docs/site_libs/font-awesome-5.1.0/webfonts/fa-regular-400.woff
docs/site_libs/font-awesome-5.1.0/webfonts/fa-regular-400.woff2
docs/site_libs/font-awesome-5.1.0/webfonts/fa-solid-900.eot
docs/site_libs/font-awesome-5.1.0/webfonts/fa-solid-900.svg
docs/site_libs/font-awesome-5.1.0/webfonts/fa-solid-900.ttf
docs/site_libs/font-awesome-5.1.0/webfonts/fa-solid-900.woff
docs/site_libs/font-awesome-5.1.0/webfonts/fa-solid-900.woff2
docs/site_libs/header-attrs-2.6/header-attrs.js
docs/site_libs/highlightjs-9.12.0/default.css
docs/site_libs/highlightjs-9.12.0/highlight.js
docs/site_libs/highlightjs-9.12.0/textmate.css
docs/site_libs/jquery-1.11.3/jquery.min.js
docs/site_libs/jqueryui-1.11.4/README
docs/site_libs/jqueryui-1.11.4/images/ui-icons_444444_256x240.png
docs/site_libs/jqueryui-1.11.4/images/ui-icons_555555_256x240.png
docs/site_libs/jqueryui-1.11.4/images/ui-icons_777620_256x240.png
docs/site_libs/jqueryui-1.11.4/images/ui-icons_777777_256x240.png
docs/site_libs/jqueryui-1.11.4/images/ui-icons_cc0000_256x240.png
docs/site_libs/jqueryui-1.11.4/images/ui-icons_ffffff_256x240.png
docs/site_libs/jqueryui-1.11.4/index.html
docs/site_libs/jqueryui-1.11.4/jquery-ui.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.js
docs/site_libs/jqueryui-1.11.4/jquery-ui.min.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.min.js
docs/site_libs/jqueryui-1.11.4/jquery-ui.structure.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.structure.min.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.theme.css
docs/site_libs/jqueryui-1.11.4/jquery-ui.theme.min.css
docs/site_libs/navigation-1.1/codefolding.js
docs/site_libs/navigation-1.1/sourceembed.js
docs/site_libs/navigation-1.1/tabsets.js
docs/site_libs/tocify-1.9.1/jquery.tocify.css
docs/site_libs/tocify-1.9.1/jquery.tocify.js
docs/sqlScripts.html
docs/style.css
docs/vocabulary.html
errorReport.txt
extras/SiteMaintenance.R
extras/codeToRun.R
extras/packageMaintenance.R
extras/reports_old/OMOP CDMv5.3.1 Specs v0.1 test.xlsx
extras/reports_old/OMOP CDMv5.3.1 Specs v0.1.xlsx
extras/reports_old/OMOP CDMv6 DQ Checks v0.1.xlsx
extras/reports_old/OMOP_CDM_PDF.Rmd
extras/reports_old/OMOP_CDM_PDF.html
extras/reports_old/OMOP_CDM_v5_3.pdf
extras/reports_old/OMOP_CDM_v6_0.pdf
extras/reports_old/OMOP_CDM_v6_0test.html
extras/reports_old/OMOP_CDM_v6_0test.pdf
extras/reports_old/testSpec.Rmd
extras/reports_old/testSpec.html
extras/testthat.R
inst/.DS_Store
inst/CommonDataModel-5.3.1_fixes/OMOP_CDMv5.3.1_Field_Level.csv
inst/CommonDataModel-5.3.1_fixes/OMOP_CDMv5.3.1_Table_Level.csv
inst/csv/OMOP_CDM_Oncology_Ex_Field_Level.csv
inst/csv/OMOP_CDM_Oncology_Ex_Table_Level.csv
inst/csv/OMOP_CDMv5.3.1_Field_Level.csv
inst/csv/OMOP_CDMv5.3.1_Table_Level.csv
inst/csv/OMOP_CDMv6.0_Field_Level.csv
inst/csv/OMOP_CDMv6.0_Table_Level.csv
inst/sql/sql_server/OMOP CDM Primary Keys.sql
inst/sql/sql_server/OMOP CDM constraints.sql
inst/sql/sql_server/OMOP CDM ddl v5_3_1 2020-10-15.sql
inst/sql/sql_server/OMOP CDM ddl v5_3_1 2020-10-16.sql
inst/sql/sql_server/OMOP CDM ddl v6_0 2020-10-16.sql
inst/sql/sql_server/OMOP CDM ddl.sql
inst/sql/sql_server/OMOP CDM fk v5_3_1 2020-10-15.sql
inst/sql/sql_server/OMOP CDM fk v5_3_1 2020-10-16.sql
inst/sql/sql_server/OMOP CDM fk v6_0 2020-10-16.sql
inst/sql/sql_server/OMOP CDM indices v5_3_1.sql
inst/sql/sql_server/OMOP CDM indices v6_0.sql
inst/sql/sql_server/OMOP CDM pk indexes required.sql
inst/sql/sql_server/OMOP CDM pk v5_3_1 2020-10-15.sql
inst/sql/sql_server/OMOP CDM pk v5_3_1 2020-10-16.sql
inst/sql/sql_server/OMOP CDM pk v6_0 2020-10-16.sql
inst/sql/sql_server/testCleanUp.sql
inst/zip/cdm_v_5_3_1_fixes.zip
man/createDdlFromFile.Rd
man/createFkFromFile.Rd
man/createPkFromFile.Rd
man/downloadCurrentDdl.Rd
man/parseWiki.Rd
man/writeConstraints.Rd
man/writeDDL.Rd
man/writeIndex.Rd
man/writePrimaryKeys.Rd
output/.DS_Store
output/bigquery/OMOP CDM bigquery ddl.txt
output/bigquery/OMOP CDM bigquery v5_3_1 ddl.sql
output/bigquery/OMOP CDM bigquery v6_0_dev ddl.sql
output/impala/OMOP CDM impala ddl.txt
output/impala/OMOP CDM impala v5_3_1 ddl.sql
output/impala/OMOP CDM impala v6_0_dev ddl.sql
output/netezza/OMOP CDM netezza ddl.txt
output/netezza/OMOP CDM netezza primary keys.txt
output/netezza/OMOP CDM netezza v6_0_dev ddl.sql
output/netezza/OMOP CDM netezzav6_0_dev primary keys.sql
output/oracle/OMOP CDM oracle v5_3_1 constraints.sql
output/oracle/OMOP CDM oracle v5_3_1 ddl.sql
output/oracle/OMOP CDM oracle v5_3_1 indices.sql
output/oracle/OMOP CDM oracle v5_3_1 primary keys.sql
output/oracle/OMOP CDM oracle v6_0 constraints.sql
output/oracle/OMOP CDM oracle v6_0 ddl.sql
output/oracle/OMOP CDM oracle v6_0 indices.sql
output/oracle/OMOP CDM oracle v6_0 pk indexes.sql
output/oracle/OMOP CDM oracle v6_0 primary keys.sql
output/oracle/OMOP CDM oracle v6_0_dev constraints.sql
output/oracle/OMOP CDM oracle v6_0_dev ddl.sql
output/oracle/OMOP CDM oracle v6_0_dev pk indexes.sql
output/oracle/oracle testCleanUp v5_3_1.sql
output/pdw/OMOP CDM pdw constraints.txt
output/pdw/OMOP CDM pdw ddl.txt
output/pdw/OMOP CDM pdw pk indexes.txt
output/pdw/OMOP CDM pdw v6_0_dev constraints.sql
output/pdw/OMOP CDM pdw v6_0_dev ddl.sql
output/pdw/OMOP CDM pdw v6_0_dev pk indexes.sql
output/postgresql/OMOP CDM postgresql v5_3_1 constraints.sql
output/postgresql/OMOP CDM postgresql v5_3_1 ddl.sql
output/postgresql/OMOP CDM postgresql v5_3_1 indices.sql
output/postgresql/OMOP CDM postgresql v5_3_1 primary keys.sql
output/postgresql/OMOP CDM postgresql v6_0 constraints.sql
output/postgresql/OMOP CDM postgresql v6_0 ddl.sql
output/postgresql/OMOP CDM postgresql v6_0 indices.sql
output/postgresql/OMOP CDM postgresql v6_0 pk indexes.sql
output/postgresql/OMOP CDM postgresql v6_0 primary keys.sql
output/postgresql/OMOP CDM postgresql v6_0_dev constraints.sql
output/postgresql/OMOP CDM postgresql v6_0_dev ddl.sql
output/postgresql/OMOP CDM postgresql v6_0_dev pk indexes.sql
output/postgresql/postgresql testCleanUp v5_3_1.sql
output/postgresql/postgresql testCleanUp v6_0.sql
output/redshift/OMOP CDM redshift ddl.txt
output/redshift/OMOP CDM redshift v5_3_1 ddl.sql
output/redshift/OMOP CDM redshift v6_0_dev ddl.sql
output/sql server/OMOP CDM sql server v5_3_1 constraints.sql
output/sql server/OMOP CDM sql server v5_3_1 ddl.sql
output/sql server/OMOP CDM sql server v5_3_1 indices.sql
output/sql server/OMOP CDM sql server v5_3_1 primary keys.sql
output/sql server/OMOP CDM sql server v6_0 constraints.sql
output/sql server/OMOP CDM sql server v6_0 ddl.sql
output/sql server/OMOP CDM sql server v6_0 indices.sql
output/sql server/OMOP CDM sql server v6_0 pk indexes.sql
output/sql server/OMOP CDM sql server v6_0 primary keys.sql
output/sql server/OMOP CDM sql server v6_0_dev constraints.sql
output/sql server/OMOP CDM sql server v6_0_dev ddl.sql
output/sql server/OMOP CDM sql server v6_0_dev pk indexes.sql
output/sql server/sql server testCleanUp v5_3_1.sql
output/sql server/sql server testCleanUp v6_0.sql
rmd/.DS_Store
rmd/_site.yml
rmd/background.Rmd
rmd/cdm30.Rmd
rmd/cdm531.Rmd
rmd/cdm531.pdf
rmd/cdm60.Rmd
rmd/contribute.Rmd
rmd/dataModelConventions.Rmd
rmd/download.Rmd
rmd/drug_dose.Rmd
rmd/faq.Rmd
rmd/favicon.html
rmd/favicon.ico
rmd/images/ATLAS_Persistence_Window.png
rmd/images/Athena_download_box.png
rmd/images/Sepsis_to_SNOMED.png
rmd/images/Usagi.png
rmd/images/diabetes-related_case.png
rmd/images/downloadJava.png
rmd/images/downloadR.png
rmd/images/downloadRStudio.png
rmd/images/important.png
rmd/images/mapping_of_concepts.png
rmd/images/no32Bits.png
rmd/images/pregnancy-related_case.png
rmd/images/rDestination.png
rmd/index.Rmd
rmd/ohdsi16x16.png
rmd/ohdsi40x40.png
rmd/oncology.Rmd
rmd/queries.Rmd
rmd/reviewProposals.Rmd
rmd/sqlScripts.Rmd
rmd/style.css
rmd/vocabulary.Rmd
