CreateVocabMapTables: Create Vocabulary Mapping Tables.

In OHDSI/ETL-Synthea: A Builder for Converting the Synthea Data to the OMOP CDM

Create Vocabulary Mapping Tables.

Description

This function creates source to source and source to standard vocab mapping tables.

Usage

CreateVocabMapTables(connectionDetails, cdmSchema, cdmVersion, sqlOnly = FALSE)

Arguments

connectionDetails	An R object of type connectionDetails created using the function createConnectionDetails in the DatabaseConnector package.
cdmSchema	The name of the database schema that will contain the Vocab mapping tables. Requires read and write permissions to this database. On SQL Server, this should specifiy both the database and the schema, so for example 'cdm_instance.dbo'.
cdmVersion	The version of your CDM. Currently "5.3" and "5.4" are supported.
sqlOnly	A boolean that determines whether or not to perform the load or generate SQL scripts. Default is FALSE.

Details

This function assumes
createCDMTables() has already been run and the Vocabulary tables have been loaded.

OHDSI/ETL-Synthea documentation built on April 23, 2024, 12:23 a.m.