infection_network_plot: Plots infection network

In OJWatson/paper: Demonstration of analysis associated to "paper outbreak" teaching practical

Description

infection_network_plot takes output of first_infection_list and plots either a time accurate network, or a "tree" network with equal branches.

Usage

infection_network_plot(first_infection_list, time = TRUE, log = TRUE,
  iterations = 10000)

Arguments

first_infection_list	Infection list outputted by first_infection_list
time	Boolean dictating is time accurate network is output. If FALSE then "tree" network with equal branches is plotted. Default = TRUE
log	Boolean that determines if the times of infection are log transformed to improve the visualisation of the non-tree plot. Default = TRUE
iterations	Numeric detailing the number igraph iterations run when calculating optimum layout. Default = 10000

OJWatson/paper documentation built on May 7, 2019, 8:33 p.m.