paper.outbreak.2016: Paper outbreak practical data

In OJWatson/paper: Demonstration of analysis associated to "paper outbreak" teaching practical

Description

These datasets represent the data collected by the Imperial College Masters paper outbreak practical.

Usage

paper.outbreak.2016

Format

A dataframe of 17 variables:

$paper.outbreak.2016: A dataframe of cases and their attributes.

• ID: Unique identifier

• Parent.ID: Unique identifier of infector

• Reinfection: Reinfection boolean

• Infection_Date: Date of infection

• Infection_Time: Time of infection

• Infection_Hours.since.start: Total hours since start of outbreak till infection

• Symptoms_Date: Date of symptoms

• Symptoms_Time: Time of symptoms

• Symptoms_Hours.since.start: Total hours since start of outbreak till symptomatic

• End_Infection_Date: Date of end of infection

• End_Infection_Time: Time of end of infection

• End_Infection_Hours.since.start: Total hours since start of outbreak till end of infection

• Onward_Infection_Hours.since.start: Total hours since start of outbreak till onward infection

• Latent_Period_Hours: Latent period in hours

• Incubation_Period_Hours: Incubation period in hours

• Infectious_Period_Hours: Infectious period in hours

• Generation_Time_Hours: Generation time in hours

Details

This dataset is meant for teaching purposes; it does not represent a real outbreak, but a simulated one for teaching purposes.

Author(s)

Data collected by Dr Ide Cremin ([e-mail]), and collated by Mr Oliver Watson ([e-mail])

References

More information on the outbreak in the following reference: TBA

Examples

## show the line list describing paper outbreak cases and their attributes
str(paper.outbreak.2016)

OJWatson/paper documentation built on May 7, 2019, 8:33 p.m.