API for PNNL-Comp-Mass-Spec/PNNL.DMS.utils
Tools for accessing PNNL's Data Management System
| Global functions | |
|---|---|
| .new_tempdir | Source code |
| collate_files | Source code |
| download_datasets_by_data_package | Man page Source code |
| get_auth | Source code |
| get_datasets_by_data_package | Man page Source code |
| get_db_connection | Source code |
| get_dms_job_records | Man page Source code |
| get_driver | Source code |
| get_job_records_by_dataset_package | Man page Source code |
| get_output_folder_for_job_and_tool | Man page Source code |
| get_results_for_multiple_jobs | Man page Source code |
| get_results_for_multiple_jobs.dt | Man page Source code |
| get_results_for_single_job | Man page Source code |
| get_results_for_single_job.dt | Man page Source code |
| get_tool_output_files_for_job_number | Man page Source code |
| get_url_from_dir_and_file | Man page Source code |
| is_PNNL_DMS_connection_successful | Man page Source code |
| make_id_to_quant_scan_link_table | Man page Source code |
| make_id_to_quant_scan_link_table_for_dataset | Man page Source code |
| path_to_FASTA_used_by_DMS | Man page Source code |
| path_to_study_design_from_DMS | Man page Source code |
| pnnl_dms_utils | Man page |
| read_AScore_results_from_DMS | Man page Source code |
| read_MSstats_from_MSFragger_job | Man page Source code |
| read_generic_job_from_DMS | Man page Source code |
| read_masic_data_from_DMS | Man page Source code |
| read_msfragger_data_from_DMS | Man page Source code |
| read_msgf_data_from_DMS | Man page Source code |
| read_study_design | Man page |
| read_study_design_from_DMS | Man page Source code |
| read_with_name | Source code |
| tool2suffix | Man page |
| write_study_design_to_DMS | Man page Source code |
