AlignRefAndRead: Align a read and a reference window. Both the forward and...
In PacificBiosciences/ccsviewr: Examine subreads from a CCS alignment view.
Description
Usage
Arguments
Value
Description
Align a read and a reference window. Both the forward and reverse direction
of the read will be aligned, and only the highest scoring alignment will be
returned.
Usage
1
AlignRefAndRead(ref, read, useAffine = FALSE)
Arguments
ref
A string that is the reference window we are aligning to.
read
A list with elements name/read.
Value
Returns a list with the aligned read, ref and score
PacificBiosciences/ccsviewr documentation built on May 7, 2019, 11:55 p.m.
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Description Usage Arguments Value
Description
Align a read and a reference window. Both the forward and reverse direction of the read will be aligned, and only the highest scoring alignment will be returned.
Usage
1 | AlignRefAndRead(ref, read, useAffine = FALSE)
|
Arguments
ref |
A string that is the reference window we are aligning to. |
read |
A list with elements name/read. |
Value
Returns a list with the aligned read, ref and score
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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