pbReseqJob: Create a resequencing job tool wrapper using a function that...

Description Usage Arguments

Description

Create a resequencing job tool wrapper using a function that takes an object returned by pbreporter() as input.

Usage

1
2
pbReseqJob(scriptFileName, toolName, func, reportid, reportTitle,
  version = "0.0.1", nproc = 1, distributed = TRUE)

Arguments

scriptFileName

The name of the R file. (e.g. myTool.R, should be the name of the file that calls this)

toolName

What is the name of the tool, should be all lowercase, no special characters.

reportid

Name of the report id.

version

Default = 0.0.1

nproc

How many processors does the tool need?

distributed

Should this run on the server or the cluster?


PacificBiosciences/pbcommandr documentation built on May 7, 2019, 11:56 p.m.