printConditionCSV: Convert a resolved condition JSON into a CSV for resubmission...

In PacificBiosciences/pbcommandr: R Package for generating reports using SMRT-Link

Description

This is utility function to convert resolved json files back into data that can be input into the web tool for resubmission. Useful for restarting users jobs.

Usage

printConditionCSV(fname)

Details

condId,host,jobId A_30662,smrtlink-beta,030662 B_30733,smrtlink-beta,030733 C_31988,smrtlink-beta,031988 D_32051,smrtlink-beta,032051 E_31989,smrtlink-beta,031989 F_32052,smrtlink-beta,032052 G_32175,smrtlink-beta,032175 H_32288,smrtlink-beta,032288 I_32332,smrtlink-beta,032332 J_32504,smrtlink-beta,032504 K_32539,smrtlink-beta,032539 L_32425,smrtlink-beta,032425 Example: printConditionCSV("/pbi/dept/secondary/siv/smrtlink/smrtlink-internal/services_ui/smrtlink_services_ui-internal-0.9.0-185199/reseq-conditions/reseq-conditions-495705c0-5d80-4716-9713-c79023855773.json")

PacificBiosciences/pbcommandr documentation built on May 7, 2019, 11:56 p.m.