plotDS: Plots difference or similarity map
In Pandora-IsoMemo/iso-app: Pandora & IsoMemo spatiotemporal modeling

plotDS

R Documentation

Plots difference or similarity map

Description

Plots difference or similarity map

Usage

plotDS(
  XPred,
  estType = "mean",
  estQuantile = 0.95,
  type = "similarity",
  independent = "",
  rangex = range(XPred$Longitude, na.rm = TRUE),
  rangey = range(XPred$Latitude, na.rm = TRUE),
  rangez = range(XPred$Est, na.rm = TRUE),
  contourType = c("filled.contour", "contour"),
  showModel = TRUE,
  showScale = TRUE,
  ncol = 10,
  colors = "RdYlGn",
  centerMap = "Europe",
  reverseColors = FALSE,
  terrestrial = 1,
  grid = TRUE,
  arrow = TRUE,
  scale = TRUE,
  simValues = NULL,
  showValues = FALSE,
  dataCenter = NULL,
  RadiusBatch = NULL,
  titleMain = TRUE,
  titleScale = TRUE,
  setAxisLabels = FALSE,
  mainLabel = "",
  yLabel = "Latitude",
  xLabel = "Longitude",
  scLabel = "",
  northSize = 0.2,
  scalSize = 0.1,
  scaleX = 0,
  scaleY = 0.1,
  NorthX = 0.025,
  NorthY = 0.925,
  AxisSize = 1,
  AxisLSize = 1,
  pointDat = NULL
)

Arguments

`XPred`	return object of similarityMap or createDifferenceMap functions
`estType`	one of "Mean", "SE" and "Quantile". defaults to "Mean"
`estQuantile`	quantile (only applicable if estType = "Quantile")
`type`	one of "similarity" or "difference" determining the type of map
`independent`	name of independent variable shown in plot
`rangex`	range of longitude values (x axis limits)
`rangey`	range of latitude values (y axis limits)
`rangez`	range of estimated values (z axis limits)
`contourType`	one of "filled.contour" or "contour"
`showModel`	show model
`showScale`	show colour scale
`ncol`	number of colors for estimates
`colors`	color scheme of estimates from RColorBrewer. defaults to "RdYlGn"
`centerMap`	center of map, one of "Europe" and "Pacific"
`reverseColors`	inverse colour scheme
`terrestrial`	show only estimates on land masses (1), oceans (-1) or all (0)
`grid`	show coordinate grid TRUE/FALSE
`arrow`	display north arrow TRUE/FALSE
`scale`	display scale TRUE/FALSE
`simValues`	if showValues: list of simulated values
`showValues`	boolean show values in plot?
`dataCenter`	data for batch estimation
`RadiusBatch`	radius
`titleMain`	show main title
`titleScale`	show scale title
`setAxisLabels`	show axis/main/scale labels
`mainLabel`	main label
`yLabel`	y lab label
`xLabel`	y lab label
`scLabel`	scale lab labels
`northSize`	size of north arrow
`scalSize`	size of scale
`scaleX`	scale x orientation
`scaleY`	scale y orientation
`NorthX`	north arrow x orientation
`NorthY`	north arrow y orientation
`AxisSize`	axis title font size
`AxisLSize`	axis label font size
`pointDat`	data frame of points to add to plot