Files in PapenfussLab/svaRetro
Retrotransposed transcript detection from structural variants
.Rbuildignore
.github/workflows/test.yaml
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/combineMatchingTranscripts.R
R/eventDetection.R
R/filterInssite.R
R/filterRT.R
R/scoreByTranscripts.R
R/svaRetro.R
R/txs2genesym.R
R/util.R
README-unnamed-chunk-8-1.png
README.Rmd
README.md
flake.lock
flake.nix
inst/extdata/diploidSV.vcf
inst/extdata/gene_symbol.txt
inst/script/data_description.txt
man/dot-combineMatchingTranscripts.Rd
man/dot-scoreByTranscripts.Rd
man/dot-txs2genesym.Rd
man/grapes-na-grapes.Rd
man/grapes-null-grapes.Rd
man/rtDetect.Rd
man/svaRetro.Rd
tests/testthat.R
tests/testthat/test-eventDetection.R
vignettes/svaRetro.Rmd
