ParhamLab/PeptidePCA: PCA using physicochemical properties of HLA
PeptidePCA contains a small suite of functions that can be used to recreate PCA figures from Hilton et al. (2017). HLA peptide sequences can be transformed into new features using an amino acid conversion matrix and then plotted using PCA. The packages ggplot2 and FactoMineR are required.
Getting started
Browse package contents
Package details |
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| Maintainer | |
| License | What license is it under? |
| Version | 0.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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