convmat.24: Amino acid conversion matrix with 24 properties
In ParhamLab/PeptidePCA: PCA using physicochemical properties of HLA
Description
Usage
Format
References
Description
Conversion matrix used to transform n-mer ligand sequences into 24 * n position-by-property features.
4 properties are physicochemical: molecular weight, surface area, hydrophobicity index, and isoelectric point.
20 properties describe identity of the amino acid at a position.
Usage
1
Format
A data frame with 20 rows (amino acids) and 24 columns (properties)
References
ParhamLab/PeptidePCA documentation built on June 3, 2019, 7:22 a.m.
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Description Usage Format References
Description
Conversion matrix used to transform n-mer ligand sequences into 24 * n position-by-property features. 4 properties are physicochemical: molecular weight, surface area, hydrophobicity index, and isoelectric point. 20 properties describe identity of the amino acid at a position.
Usage
1 |
Format
A data frame with 20 rows (amino acids) and 24 columns (properties)
References
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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