Files in ParkerICI/scgraphs
Analyzing single-cell data using graphs
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/RcppExports.R
R/forceatlas2.R
R/io.R
R/scaffold.R
R/scgraphs-package.R
R/shiny_helpers.R
R/unsupervised.R
README.md
inst/shinyGUI/server.R
inst/shinyGUI/ui.R
man/add_inter_clusters_connections.Rd
man/add_vertices_to_landmarks_graph.Rd
man/build_graph.Rd
man/build_umap_graph.Rd
man/complete_forceatlas2.Rd
man/cosine_similarity_from_matrix.Rd
man/cosine_similarity_matrix.Rd
man/distance_from_attractor_hard_filter.Rd
man/downsample_by.Rd
man/filter_matrix.Rd
man/filter_matrix_by_rank.Rd
man/get_distances_from_landmarks.Rd
man/get_highest_scoring_edges.Rd
man/get_scaffold_map.Rd
man/get_unsupervised_graph.Rd
man/get_unsupervised_graph_from_files.Rd
man/layout_forceatlas2.Rd
man/load_landmarks.Rd
man/load_landmarks_from_dir.Rd
man/run_scaffold_analysis.Rd
man/vite.Rd
man/vite_GUI.Rd
man/write_clusters_data.Rd
man/write_graph.Rd
man/write_landmarks_data.Rd
man/write_scaffold_output.Rd
scgraphs.Rproj
src/.gitignore
src/RcppExports.cpp
src/filter_matrix.cpp
src/forceatlas2.cpp
