update_result: Update result

In PavlidisLab/gemma.R: A wrapper for Gemma's Restful API to access curated gene expression data and differential expression analyses

Update result

Description

Re-runs the function used to create a gemma.R output to update the data at hand. Useful if you have a reason to believe parts of the data has changed since your last accession and you wish to update while decoupling the update process from your original code used to generate the data.

Usage

update_result(query)

Arguments

query

Output from a gemma.R function

Details

Note that if you have used the file and overwrite arguments with the original call, this will also repeat to regenarete the file based on your initial preference

Examples

annots <- get_dataset_annotations(1)
# wait for a couple of years..
# wonder if the results are the same
updated_annots <- update_result(annots)

# also works with outputs of get_all_pages
platforms <- get_all_pages(get_platforms_by_ids())
updated_platforms <- update_result(platforms)

PavlidisLab/gemma.R documentation built on May 1, 2024, 10:48 p.m.