PavlidisLab/gemma.R: A wrapper for Gemma's Restful API to access curated gene expression data and differential expression analyses

Low- and high-level wrappers for Gemma's RESTful API. They enable access to curated expression and differential expression data from over 10,000 published studies. Gemma is a web site, database and a set of tools for the meta-analysis, re-use and sharing of genomics data, currently primarily targeted at the analysis of gene expression profiles.

Getting started

Package details

Bioconductor views Annotation BatchEffect Bayesian DataImport DifferentialExpression ExperimentalDesign GeneExpression Microarray Normalization Preprocessing SingleCell Software ThirdPartyClient
LicenseApache License (>= 2)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
PavlidisLab/gemma.R documentation built on Sept. 29, 2023, 1:52 a.m.