Files in PheWAS/PheWAS
Phenome Wide Association Studies (PheWAS)
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/addPhecodeInfo.R
R/addPhewasDescription.R
R/addPhewasGroups.R
R/contr.phewas.R
R/createPhenotypes.R
R/createPhewasTable.R
R/default_code_agg.R
R/generateExample.R
R/mapCodesToPhecodes.R
R/mapICD9ToPhecodes.R
R/mapICD9toPheWAS.R
R/mapPheWAStoExclusions.R
R/mapPhecodesToExclusions.R
R/phe_as.R
R/phe_as_clogit.R
R/phe_as_ext.R
R/phe_as_logistf.R
R/phe_as_lrt.R
R/phe_as_unadjusted.R
R/phenotypeManhattan.R
R/phenotypePlot.R
R/phewas-globalVariables.R
R/phewas.R
R/phewasDT.R
R/phewasManhattan.R
R/phewasMeta.R
R/phewasMetaModels.R
R/phewas_ext.R
R/phewas_meta_logic.R
R/plinkPhewasExport.R
R/restrictPhecodesBySex.R
R/zzz.R
README.md
data/phecode_exclude.rda
data/phecode_map.rda
data/phecode_map_icd10.rda
data/phecode_rollup_map.rda
data/pheinfo.rda
data/phemap.rda
data/sex_restriction.RData
inst/CITATION
inst/doc/PheWAS-package.pdf
man/PheWAS-defunct.Rd
man/PheWAS_Plotting.Rd
man/addPhecodeInfo.Rd
man/createPhenotypes.Rd
man/createPhewasTable.Rd
man/generateExample.Rd
man/mapCodesToPhecodes.Rd
man/mapICD9ToPhecodes.Rd
man/mapPhecodesToExclusions.Rd
man/phecode_exclude.Rd
man/phecode_map.Rd
man/phecode_map_icd10.Rd
man/phecode_rollup_map.Rd
man/pheinfo.Rd
man/phemap.Rd
man/phewas-package.Rd
man/phewas.Rd
man/phewasDT.Rd
man/phewasMeta.Rd
man/phewasMetaModels.Rd
man/phewas_ext.Rd
man/plinkPhewasExport.Rd
man/restrictPhecodesBySex.Rd
man/sex_restriction.Rd
vignettes/PheWAS-package.Rnw
