getBegEndIndMSP: Get beginning and end indices of each entry in a 'data.frame'...
In PlantDefenseMetabolism/MetabolomicTools: Navigating mass spectral similarity in high-resolution MS/MS metabolomics data
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
Get beginning and end indices of each entry in a
data.frame in a peaks(MSP)-object
Usage
1
getBegEndIndMSP(msp)
Arguments
msp
data.frame in peaks(MSP)-object, see
?convert2MSP for further information
Details
Internal use to retrieve start and end row indices for fragments of
MS/MS features.
Value
getBegEndIndMSP returns a list of length 2 where the first
entry contains the start indices and the second the end indices
Author(s)
Thomas Naake, thomasnaake@googlemail.com
Examples
1
2
3
4
5
data("sd02_deconvoluted", package = "MetCirc")
finalMSP <- convert2MSP(sd02_deconvoluted, split = " _ ",
splitIndMZ = 2, splitIndRT = 3)
finalMSPdf <- peaks(finalMSP)
getBegEndIndMSP(finalMSPdf)
PlantDefenseMetabolism/MetabolomicTools documentation built on May 8, 2019, 2:53 p.m.
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Description Usage Arguments Details Value Author(s) Examples
Description
Get beginning and end indices of each entry in a
data.frame in a peaks(MSP)-object
Usage
1 | getBegEndIndMSP(msp)
|
Arguments
msp |
|
Details
Internal use to retrieve start and end row indices for fragments of MS/MS features.
Value
getBegEndIndMSP returns a list of length 2 where the first
entry contains the start indices and the second the end indices
Author(s)
Thomas Naake, thomasnaake@googlemail.com
Examples
1 2 3 4 5 | data("sd02_deconvoluted", package = "MetCirc")
finalMSP <- convert2MSP(sd02_deconvoluted, split = " _ ",
splitIndMZ = 2, splitIndRT = 3)
finalMSPdf <- peaks(finalMSP)
getBegEndIndMSP(finalMSPdf)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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