msp2msp: Example data for 'MetCirc': 'msp2msp'
In PlantDefenseMetabolism/MetabolomicTools: Navigating mass spectral similarity in high-resolution MS/MS metabolomics data
Description
Usage
Format
Value
Author(s)
Source
Description
convertMSP2MSP contains the object msp2msp
that is a data frame in .MSP format, a typical format for MS/MS library
building. Each entry consists of the metabolite name (NAME), the precursor
mz (PRECURSORMZ), the retention
time (RETENTIONTIME), number of peaks (Num Peaks), together with fragments and their
intensity values. In the example used in the function convertMSP2MSP
the matrix msp2msp is used to construct an object of class MSP.
Usage
1
Format
data.frame
Value
data.frame
Author(s)
Thomas Naake, thomasnaake@googlemail.com
Source
http://prime.psc.riken.jp/Metabolomics_Software/MS-DIAL/, truncated
.MSP file of GNPS MS/MS Negative (contains 22 entries):
http://prime.psc.riken.jp/Metabolomics_Software/MS-DIAL/MSMS-GNPS-Curated-Neg.msp
PlantDefenseMetabolism/MetabolomicTools documentation built on May 8, 2019, 2:53 p.m.
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Description Usage Format Value Author(s) Source
Description
convertMSP2MSP contains the object msp2msp
that is a data frame in .MSP format, a typical format for MS/MS library
building. Each entry consists of the metabolite name (NAME), the precursor
mz (PRECURSORMZ), the retention
time (RETENTIONTIME), number of peaks (Num Peaks), together with fragments and their
intensity values. In the example used in the function convertMSP2MSP
the matrix msp2msp is used to construct an object of class MSP.
Usage
1 |
Format
data.frame
Value
data.frame
Author(s)
Thomas Naake, thomasnaake@googlemail.com
Source
http://prime.psc.riken.jp/Metabolomics_Software/MS-DIAL/, truncated .MSP file of GNPS MS/MS Negative (contains 22 entries): http://prime.psc.riken.jp/Metabolomics_Software/MS-DIAL/MSMS-GNPS-Curated-Neg.msp
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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