Files in PolinaPavlovich/CONCLUS
ScRNA-seq workflow CONCLUS - from CONsensus CLUSters to a meaningful CONCLUSion.
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/visualisation_and_clustering_functions.R
README.md
conclus.Rproj
conclus_manual.pdf
inst/extdata/Bergiers_colData_filtered.tsv
inst/extdata/Bergiers_counts_matrix_filtered.tsv
inst/extdata/Mmus_gene_database_secretedMol.tsv
man/addClusteringManually.Rd
man/calculateClustersSimilarity.Rd
man/choosePalette.Rd
man/clusterCellsInternal.Rd
man/exportClusteringResults.Rd
man/exportMatrix.Rd
man/generateTSNECoordinates.Rd
man/getGenesInfo.Rd
man/getMarkerGenes.Rd
man/initialisePath.Rd
man/normaliseCountMatrix.Rd
man/plotCellHeatmap.Rd
man/plotCellSimilarity.Rd
man/plotClusteredTSNE.Rd
man/plotClustersSimilarity.Rd
man/plotGeneExpression.Rd
man/rankGenes.Rd
man/runCONCLUS.Rd
man/runClustering.Rd
man/runDBSCAN.Rd
man/saveGenesInfo.Rd
man/saveMarkersLists.Rd
man/testClustering.Rd
vignettes/conclus_vignette.R
vignettes/conclus_vignette.Rmd
vignettes/conclus_vignette.html
