calculateClustersSimilarity: Having cells similarity, calculate clusters similarity.

Description Usage Arguments Value

Description

Having cells similarity, calculate clusters similarity.

Usage

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calculateClustersSimilarity(cellsSimilarityMatrix, sceObject,
  clusteringMethod)

Arguments

cellsSimilarityMatrix

a similarity matrix, one of the results of conclus::clusterCellsInternal() function.

sceObject

a SingleCellExperiment object with your experiment.

clusteringMethod

a clustering methods passed to hclust() function.

Value

A list contating the cluster similarity matrix and cluster names (order).


PolinaPavlovich/CONCLUS documentation built on May 10, 2019, 2:42 p.m.