PoonLab/highlineR: A Novel Visualization Tool to Assess Diversity in NGS Data

A novel visualization tool to assess diversity in NGS data. Similar to the Los Alamos Highlighter tool, highlineR highlights mismatches, transition and transversion mutations, and synonymous and non-synonymous mutations in aligned protein or nucleotide sequences. This tool also visualizes the relative frequency of sequence variants and is particularly useful for visualizing sequence diversity, potential recombination and super-infection.

install.packages("remotes")
remotes::install_github("PoonLab/highlineR")