import_file: Import NGS file.

In PoonLab/highlineR: A Novel Visualization Tool to Assess Diversity in NGS Data

Description

import_file creates a Data object for an NGS file.

Usage

import_file(path, datatype, seqtype, session, force = FALSE)

Arguments

path	A character string representing the absolute path to sequence file.
datatype	A character string representing the file type. Default value is file extension (last of all period (".") separated extensions).
seqtype	A character string representing the sequence type. Options: "nucleotide" (default) or "amino acid".
session	session object or character string name of session object into which NGS data should be imported. Default is "highlineR.session".
force	A logical value specifying if previously imported file should be overwritten and re-imported.

Value

Imports specified NGS file into specified highlineR session.

PoonLab/highlineR documentation built on Aug. 2, 2019, 4:32 p.m.