Files in PriceLab/TrenaProjectHG38
TrenaProjectHG38 - an abstract base class for all hg38 projects
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/GeneHancerDB.R
R/TrenaProjectHG38.R
README.md
inst/extdata/covariates/.Rhistory
inst/extdata/covariates/dummyCovariates.RData
inst/extdata/expression/.Rhistory
inst/extdata/expression/dummyExpressionSet_1.RData
inst/extdata/expression/dummyExpressionSet_2.RData
inst/extdata/geneInfoTable.RData
inst/extdata/geneInfoTable_hg38.RData
inst/extdata/geneInfoTable_mm10.RData
inst/extdata/genomeAnnotation/geneHancer.v4.7.allGenes.RData
inst/extdata/genomeAnnotation/manifest.yaml
inst/extdata/tbl.geneSym-ensembl-map.RData
inst/extdata/testing/tbl.gh.results.toTestReductionPreservingTissues.RData
inst/extdata/variants/someGene.region.vcf
inst/extdata/variants/tbl.snp.gwas.minimal.RData
inst/scripts/buildGeneInfoTable/buildGeneInfoTable.R
inst/scripts/buildGeneInfoTable/buildGeneInfoTable_mm10.R
inst/unitTests/test_GeneHancerDB.R
inst/unitTests/test_TrenaProjectHG38.R
makefile
man/GeneHancerDB-class.Rd
man/TrenaProjectHG38-class.Rd
man/getChipSeq.Rd
man/getEncodeDHS.Rd
man/getEnhancerTissues.Rd
man/getEnhancers.Rd
man/getGeneEnhancersRegion.Rd
man/getGeneRegulatoryRegions.Rd
man/listTissues.Rd
man/retrieveEnhancersFromDatabase.Rd
