getGeneRegulatoryRegions: Get gene regulatory regions for the current target gene, or...

In PriceLab/TrenaProjectHG38: TrenaProjectHG38 - an abstract base class for all hg38 projects

Get gene regulatory regions for the current target gene, or one explicitly named, using the specified strategy

Description

Get gene regulatory regions for the current target gene, or one explicitly named, using the specified strategy

Usage

## S4 method for signature 'TrenaProjectHG38'
getGeneRegulatoryRegions(
  obj,
  targetGene = NA,
  tissues = "all",
  geneHancerMissing.promoter.upstream = 0,
  geneHancerMissing.promoter.downstream = 0,
  geneHancerSupplemental.promoter.upstream = 0,
  geneHancerSupplemental.promoter.downstream = 0
)

Arguments

obj	An object of class TrenaProjectHG38
targetGene	default NA, in which case the current object's targetGene is used.

See Also

setTargetGene

PriceLab/TrenaProjectHG38 documentation built on July 5, 2022, 3:25 p.m.