nodeToPhy: Add Node Constraints to Tree in MCMCtree Format
In PuttickMacroevolution/MCMCtreeR: Prepare MCMCtree Analyses and Plot Bayesian Divergence Time Analyses Estimates on Trees
Description
Usage
Arguments
Value
Author(s)
Description
Produce tree with node labels in MCMCtree format
Usage
1
Arguments
phy
fully resolved phylogeny in ape format
monoGroups
list with each element containing species that define a node of interest
nodeCon
node distributions in MCMCtreeR format
returnPhy
logical specifying whether to return phy to console or write MCMCtree for input (default = TRUE)
Value
If returnPhy=TRUE phylogeny with node labels in ape format
If returnPhy=FALSE phylogeny with node labels in MCMCtree format
Author(s)
Mark Puttick
PuttickMacroevolution/MCMCtreeR documentation built on Nov. 24, 2019, 5:22 a.m.
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Description Usage Arguments Value Author(s)
Description
Produce tree with node labels in MCMCtree format
Usage
1 |
Arguments
phy |
fully resolved phylogeny in ape format |
monoGroups |
list with each element containing species that define a node of interest |
nodeCon |
node distributions in MCMCtreeR format |
returnPhy |
logical specifying whether to return phy to console or write MCMCtree for input (default = TRUE) |
Value
If returnPhy=TRUE phylogeny with node labels in ape format
If returnPhy=FALSE phylogeny with node labels in MCMCtree format
Author(s)
Mark Puttick
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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