Sparse Gaussian Graphical Model Estimation, Visualization and Evaluation

aal116coordinates | AAL116 brain atlas coordinates in MNI space |

ABIDE_aal116_timeseries | ABIDE I preprocessed time series grouped by control and... |

add_name_to_out | helper function to add row/col names to JointNets precision... |

AUC | return AUC score for JointNets method |

BIC | calculate BIC score for JointNets method |

cancer | Microarray data set for breast cancer |

diffee | Fast and Scalable Learning of Sparse Changes in... |

diffeek | Fast and Scalable Estimator for Using Additional Knowledge in... |

exampleData | A simulated toy dataset that includes 2 data matrices (from 2... |

exampleDataGraph | A simulated toy dataset that includes 3 igraph objects |

F1 | Compute F1 score for JointNets result |

F1.diffee | computes F1 score for jointnet result |

F1.diffeek | computes F1 score for jointnet result |

F1.fasjem | computes F1 score for jointnet result |

F1.jeek | computes F1 score for jointnet result |

F1.simule | computes F1 score for jointnet result |

F1.wsimule | computes F1 score for jointnet result |

fasjem | A Fast and Scalable Joint Estimator for Learning Multiple... |

generateSampleList | function to generate a list of samples from simulatedGraph... |

generateSamples | function to generate samples from a single precision matrix |

jeek | A Fast and Scalable Joint Estimator for Integrating... |

jointplot | core function to plot |

nip_37_data | NIPS word count dataset |

plotbrain | plot 3d brain network from JointNets result |

plotbrain.diffee | plot 3d brain network from diffee result |

plotbrain.diffeek | plot 3d brain network from diffeek result |

plotbrain.fasjem | plot 3d brain network from fasjem result |

plotbrain.jeek | plot 3d brain network from jeek result |

plotbrain_joint | plot 3d brain network |

plotbrain.simule | plot 3d brain network from simule result |

plotbrain.wsimule | plot 3d brain network from wsimule result |

plot.diffee | plot diffee result specified by user input |

plot.diffeek | plot diffeek result specified by user input |

plot.fasjem | Plot fasjem result specified by user input |

plot_gui | GUI of JointNets plot |

plot.jeek | Plot jeek result specified by user input |

plot.simulation | Plot simulatedgraph result (generated from function... |

plot.simule | Plot simule result specified by user input |

plot.wsimule | Plot wsimule result specified by user input |

returngraph | return igraph object from jointnet result specified by user... |

returngraph.diffee | return igraph object from diffee result specified by user... |

returngraph.diffeek | return igraph object from diffee result specified by user... |

returngraph.fasjem | return igraph object from fasjem result specified by user... |

returngraph.jeek | return igraph object from jeek result specified by user input |

returngraph.simulation | return igraph object from simulation result specified by user... |

returngraph.simule | return igraph object from simule result specified by user... |

returngraph.wsimule | return igraph object from wsimule result specified by user... |

simulateGraph | function to simulate multiple sparse graphs |

simulation | simulate multiple sparse graphs and generate samples |

simule | A constrained l1 minimization approach for estimating... |

wsimule | A constrained and weighted l1 minimization approach for... |

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