RC-88/CaDrA: Candidate Driver Analysis

Performs both stepwise and backward heuristic search for candidate (epi)genetic drivers based on a binary multi-omics dataset. CaDrA's main objective is to identify features which, together, are significantly skewed or enriched pertaining to a given vector of continuous scores (e.g. sample-specific scores representing a phenotypic readout of interest, such as protein expression, pathway activity, etc.), based on the union occurence (i.e. logical OR) of the events.

Getting started

Package details

Bioconductor views FeatureExtraction GeneExpression Microarray RNASeq Software
Maintainer
LicenseGPL-3 + file LICENSE
Version0.99.2
URL https://github.com/montilab/CaDrA/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("RC-88/CaDrA")
RC-88/CaDrA documentation built on March 28, 2023, 12:18 a.m.