scores: Fetch the table of scores and metadata from a COMPASSResult...

Description Usage Arguments Examples

View source: R/COMPASSResult-methods.R

Description

This function extracts the functionality and polyfunctionality scores from a COMPASS result merged with the sample metadata table, accounting for any dropped samples due to filtering.

Usage

1

Arguments

x

A COMPASSResult object.

markers

A character vector of markers for which to compute the scores. Defaults to all markers. Must match the names returned by markers().

Examples

1

RGLab/COMPASS documentation built on Feb. 11, 2021, 3:23 p.m.