HivFeature-class: Class '"HivFeature"'
In RGLab/HIV.db: HIV Annotation

Description Objects from the Class Slots Methods Author(s) See Also Examples

The class that stores HIV features.

Objects can be created by calls of the form new("HivFeature", ...).

HIV_db:: an environment that stores HIV feature database
ranges:: an IRanges object that stores the start, end and width of all the epitopes
values:: a DataFrame
elementType:: "ANY"
elementMetadata:: NULL
metadata:: a list

getFrame: signature(object = "HivFeature"): ...
getHXB2Coordinates: signature(object = "HivFeature"): ...
getName: signature(object = "HivFeature"): ...
show: signature(object = "HivFeature"): ...

Mike Jiang,Raphael Gottardo

Epitope,getAA,getDNA,getFeature,getChildren, getParent

library(HIV.db)

## load Table from db with default parameters (ref="env").
HIV_db<-loadFeatures()

feature1<-getFeature(HIV_db)
show(feature1)

getHXB2Coordinates(feature1)
getName(feature1)
getFrame(feature1)