impute: impute missing continuous expression for plotting
In RGLab/MAST: Model-based Analysis of Single Cell Transcriptomics
impute R Documentation
impute missing continuous expression for plotting
Description
If there are no positive observations for a contrast, it is generally not estimible.
However, for the purposes of testing we can replace it with the least favorable value with respect to the contrasts that are defined.
Usage
impute(object, groupby)
Arguments
object
Output of predict
groupby
Variables (column names in predict) to group by for imputation (facets of the plot)
Value
data.table
Examples
##See stat_ell
example(stat_ell)
RGLab/MAST documentation built on Sept. 30, 2023, 1:08 p.m.
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| impute | R Documentation |
impute missing continuous expression for plotting
Description
If there are no positive observations for a contrast, it is generally not estimible. However, for the purposes of testing we can replace it with the least favorable value with respect to the contrasts that are defined.
Usage
impute(object, groupby)
Arguments
object |
Output of predict |
groupby |
Variables (column names in predict) to group by for imputation (facets of the plot) |
Value
data.table
Examples
##See stat_ell
example(stat_ell)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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