densityplot-GatingHierarchy-character-method: plot the population as densityplot for the channels...

densityplot,GatingHierarchy,character-methodR Documentation

plot the population as densityplot for the channels associated with the gate

Description

It is used to check the 1d density of the parent for the purpose of choosing appropriate 1d gating algorithm or fine tune the gating parameters.

Usage

## S4 method for signature 'GatingHierarchy,character'
densityplot(x, data, ...)

Arguments

x

GatingHierarchy

data

node/population name

Examples

library(flowWorkspace)
dataDir <- system.file("extdata",package="flowWorkspaceData")
suppressMessages(gs <- load_gs(list.files(dataDir, pattern = "gs_manual",full = TRUE)))
densityplot(gs[[1]], "CD4")

RGLab/cytoUtils documentation built on June 17, 2022, 8:07 a.m.