biomart_df | Dataframe-based biomart query. |
check_coloc_data_format | Check coloc data format |
convert_loc_to_rs | Convert CHR:BP locations to rs ids. |
convert_rs_to_loc | Convert rs ids to CHR:BP locations. |
deprecated | Deprecated function: tidy GWASs |
dot-query_biomart | Vector-based biomart query. |
get_coloc_results | Run coloc |
get_genes_within_1Mb_of_signif_SNPs | Get genes within +/- 1Mb of significant SNPs |
get_varbeta | Get varbeta |
join_coloc_datasets | Join coloc datasets |
make_results_dir | Make results directory |
merge_coloc_summaries | Merge coloc summaries |
pipe | Pipe operator |
save_coloc_results | Save coloc results |
tidy_eQTL_eQTLGen | Tidy eQTLGen eQTLs for use with coloc. |
tidy_eQTL_psychencode | Tidy psychencode eQTLs for use with coloc. |
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