tidy_eQTL_eQTLGen: Tidy eQTLGen eQTLs for use with coloc.
In RHReynolds/colochelpR: `colochelpR` is a home for helper functions for executing coloc
View source: R/coloc_eQTL_tidying.R
tidy_eQTL_eQTLGen R Documentation
Tidy eQTLGen eQTLs for use with coloc.
Description
Tidy eQTLGen eQTLs for use with coloc.
Usage
tidy_eQTL_eQTLGen(eQTLGen_QTLs)
Arguments
eQTLGen_QTLs
df. Full cis-eQTL summary statistics, as downloaded from
https://www.eqtlgen.org/cis-eqtls.html. Should be post 2019-12-23
changelog update.
Value
Tidy dataframe with eQTLGen eQTLs. Note that the dataframe includes
an additional column (SNP_rs). This is necessary for MAF lookup, but should
be removed prior to submitting to colochelpR::get_coloc_results().
RHReynolds/colochelpR documentation built on June 18, 2022, 5:53 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/coloc_eQTL_tidying.R
| tidy_eQTL_eQTLGen | R Documentation |
Tidy eQTLGen eQTLs for use with coloc.
Description
Tidy eQTLGen eQTLs for use with coloc.
Usage
tidy_eQTL_eQTLGen(eQTLGen_QTLs)
Arguments
eQTLGen_QTLs |
df. Full cis-eQTL summary statistics, as downloaded from https://www.eqtlgen.org/cis-eqtls.html. Should be post 2019-12-23 changelog update. |
Value
Tidy dataframe with eQTLGen eQTLs. Note that the dataframe includes
an additional column (SNP_rs). This is necessary for MAF lookup, but should
be removed prior to submitting to colochelpR::get_coloc_results().
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.