convert_rs_to_loc: Convert rs ids to CHR:BP locations.

In RHReynolds/colochelpR: `colochelpR` is a home for helper functions for executing coloc

Convert rs ids to CHR:BP locations.

Description

Convert rs ids to CHR:BP locations.

Usage

convert_rs_to_loc(df, SNP_column, dbSNP)

Arguments

df	dataframe. Dataframe containing SNPs as rs ids.
SNP_column	chr. Name of column (in quotation marks) containing rs ids in dataframe.
dbSNP	BS genome reference snps (choose appropriate dbSNP build dependent on genome build).

Value

Dataframe with rs ids and CHR:BP locations.

RHReynolds/colochelpR documentation built on June 18, 2022, 5:53 a.m.