NEWS.md

In RJ333/phyloseq2ML: Connects Phyloseq To Ranger And Keras

Version 0.5.1

• Fixed vignette code and modified the README.md

Version 0.5

• Vignette added demonstrating a possible workflow using built-in data set
• Naming patterns changed to open up for users
• oversample function is now more appropriately called augment function
• relative abundance is used for filtering
• ranger regression mtry set to 1/3 of available independent variables as default
• speedyseq support added for tax_glom

Version 0.4

• Keras tensorflow classification runs using purrr:pmap including metrics implemented

Version 0.3

• Ranger classification runs using purrr:pmap including metrics implemented
• Binary classification is now treated as special case of multi class classification and does not utilize specific binary_* functions anymore

Version 0.2

• Implemented functions to prepare data from phyloseq for Machine Learning with ranger and keras

Version 0.1

• Initial version of the package with first phyloseq subsetting functions

RJ333/phyloseq2ML documentation built on June 2, 2020, 9:25 p.m.